| Issue Date | Title | Author(s) |
 | 2013 | Direct folding simulation of a long helix in explicit water | Zhang, John Z. H.; Gao, Ya; Lu, Xiaoliang; Duan, Lili; Zhang, Dawei; Mei, Ye |
| | 2012 | Folding and thermodynamic studies of Trp-cage based on polarized force field | Zhang, John Z. H.; Mei, Ye; Wei, Caiyi; Yip, Yew Mun; Ho, Chun Ying; Zhang, Dawei |
| | 2012 | A fragmentation approach to quantum calculation of large molecular systems | Zhang, Dawei; Ji, Changge; Mei, Ye; Zhang, John Z. H.; He, Xiao |
| | 2013 | The intrinsic helical propensities of the helical fragments in prion protein under neutral and low pH conditions : a replica exchange molecular dynamics study | Zhang, John Z. H.; Lu, Xiaoliang; Zeng, Juan; Gao, Ya; Zhang, Dawei; Mei, Ye |
| | 2011 | Replica exchange molecular dynamics simulation of structure variation from α/4β-fold to 3α-fold protein | Lazim, Raudah; Mei, Ye; Zhang, Dawei |
| 2012 | Solvent effect on the folding dynamics and structure of E6-associated protein characterized from Ab initio protein folding simulations | Xu, Zhijun; Lazim, Raudah; Sun, Tiedong; Mei, Ye; Zhang, Dawei |
| | 2012 | Stability of the β-structure in prion protein : a molecular dynamics study based on polarized force field | Mei, Ye; Zhang, Dawei; Xu, Zhijun; Lazim, Raudah |
