Browsing by Author Nordenskiöld, Lars
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| Issue Date | Title | Author(s) | |
|---|---|---|---|
 | 2013 | An advanced coarse-grained nucleosome core particle model for computer simulations of nucleosome-nucleosome interactions under varying ionic conditions | Fan, Yanping; Korolev, Nikolay; Nordenskiöld, Lars; Lyubartsev, Alexander P. |
| 2011 | Biophysical properties and supramolecular structure of self-assembled liposome/ε-peptide/DNA nanoparticles : correlation with gene delivery | Yan, Jiang; Korolev, Nikolay; Eom, Khee Dong; Nordenskiöld, Lars; Tam, James P. | |
| 2021 | Bottom-up coarse-grained modeling of DNA | Sun, Tiedong; Minhas, Vishal; Korolev, Nikolay; Mirzoev, Alexander; Lyubartsev, Alexander P.; Nordenskiöld, Lars |
| 2015 | Chromatin compaction under mixed salt conditions : opposite effects of sodium and potassium ions on nucleosome array folding | Allahverdi, Abdollah; Chen, Qinming; Korolev, Nikolay; Nordenskiöld, Lars |
| 2014 | A coarse-grained DNA model parameterized from atomistic simulations by inverse Monte Carlo | Korolev, Nikolay; Luo, Di; Lyubartsev, Alexander P.; Nordenskiöld, Lars |
| 2020 | Compaction and self-association of megabase-sized chromatin are induced by anionic protein crowding | Zinchenko, Anatoly; Chen, Qinming; Berezhnoy, Nikolay V.; Wang, Sai; Nordenskiöld, Lars |
| 2014 | Conformation-dependent DNA attraction | Nordenskiöld, Lars; Zhou, Ruhong; Mu, Yuguang; Li, Weifeng |
| 2020 | Dynamic networks observed in the nucleosome core particles couple the histone globular domains with DNA | Shi, Xiangyan; Prasanna, Chinmayi; Soman, Aghil; Pervushin, Konstantin; Nordenskiöld, Lars |
| 2018 | The effect of linker DNA on the structure and interaction of nucleosome core particles | Huang, Yen-Chih; Su, Chun-Jen; Korolev, Nikolay; Berezhnoy, Nikolay V.; Wang, Sai; Soman, Aghil; Chen, Chun-Yu; Chen, Hsin-Lung; Jeng, U-Ser; Nordenskiöld, Lars |
| 2011 | The effect of salt on oligocation-induced chromatin condensation | Korolev, Nikolay; Zhao, Yongqian; Allahverdi, Abdollah; Eom, Khee Dong; Nordenskiöld, Lars; Tam, James P. | |
| 2014 | How histone modifications change nucleosome stability : FRET studies on single molecules and in bulk | Langowski, Jörg; Tóth, Katalin; Gansen, Alexander; Hetey, Szabolcs; Székvölgyi, Loránd; Nordenskiöld, Lars |
| 2020 | The human telomeric nucleosome displays distinct structural and dynamic properties | Soman, Aghil; Liew, Chong Wai; Teo, Hsiang Ling; Berezhnoy, Nikolay V.; Olieric, Vincent; Korolev, Nikolay; Rhodes, Daniela; Nordenskiöld, Lars |
| 2011 | Influence of histone tails and H4 tail acetylations on nucleosome–nucleosome interactions | Liu, Ying; Lu, Chenning; Yang, Ye; Fan, Yanping; Yang, Renliang; Liu, Chuan Fa; Korolev, Nikolay; Nordenskiöld, Lars |
| 2016 | The Influence of Ionic Environment and Histone Tails on Ordered Columnar Phases of Nucleosome Core Particles | Berezhnoy, Nikolay V.; Liu, Ying; Allahverdi, Abdollah; Yang, Renliang; Su, Chun-Jen; Liu, Chuan-Fa; Korolev, Nikolay; Nordenskiöld, Lars |
| 2014 | ISWI remodelling of physiological chromatin fibres acetylated at Lysine 16 of Histone H4 | Klinker, Henrike; Mueller-Planitz, Felix; Nordenskiöld, Lars; Yang, Renliang; Forné, Ignasi; Liu, Chuan-Fa; Becker, Peter B. |
| 2021 | Linker histone defines structure and self-association behaviour of the 177 bp human chromatosome | Wang, Sai; Vogirala, Vinod Kumar; Soman, Aghil; Berezhnoy, Nikolay V.; Liu, Barry Zhehui; Wong, Andrew See Weng; Korolev, Nikolay; Su, Chun-Jen; Sandin, Sara; Nordenskiöld, Lars |
| 2018 | Magic v.3 : an integrated software package for systematic structure-based coarse-graining | Mirzoev, Alexander; Nordenskiöld, Lars; Lyubartsev, Alexander |
| 2020 | Modeling DNA flexibility : comparison of force fields from atomistic to multiscale levels | Minhas, Vishal; Sun, Tiedong; Mirzoev, Alexander; Korolev, Nikolay; Lyubartsev, Alexander P.; Nordenskiöld, Lars |
| 2012 | Modelling chromatin structure and dynamics : status and prospects | Korolev, Nikolay; Fan, Yanping; Nordenskiöld, Lars; Lyubartsev, Alexander P. | |
| 2014 | Molecular dynamics simulations demonstrate the regulation of DNA-DNA attraction by H4 histone tail acetylations and mutations | Korolev, Nikolay; Yu, Hang; Lyubartsev, Alexander P.; Nordenskiöld, Lars |