| Issue Date | Title | Author(s) |
| 2019 | Arabidopsis RCD1 coordinates chloroplast and mitochondrial functions through interaction with ANAC transcription factors | Shapiguzov, Alexey; Fernie, Alisdair R.; Vainonen, Julia P.; Hunter, Kerri; Tossavainen, Helena; Tiwari, Arjun; Järvi, Sari; Hellman, Maarit; Aarabi, Fayezeh; Alseekh, Saleh; Wybouw, Brecht; Van Der Kelen, Katrien; Nikkanen, Lauri; Krasensky-Wrzaczek, Julia; Sipari, Nina; Keinänen, Markku; Tyystjärvi, Esa; Rintamäki, Eevi; De Rybel, Bert; Salojärvi, Jarkko; Van Breusegem, Frank; Brosché, Mikael; Permi, Perttu; Aro, Eva-Mari; Wrzaczek, Michael; Kangasjärvi, Jaakko |
| 2018 | Assembly and analysis of unmapped genome sequence reads reveal novel sequence and variation in dogs | Holden, Lindsay A.; Arumilli, Meharji; Hytönen, Marjo K.; Hundi, Sruthi; Salojärvi, Jarkko; Brown, Kim H.; Lohi, Hannes |
| 2019 | The avocado genome informs deep angiosperm phylogeny, highlights introgressive hybridization, and reveals pathogen-influenced gene space adaptation | Rendón-Anaya, Martha; Ibarra-Laclette, Enrique; Méndez-Bravo, Alfonso; Lan, Tianying; Zheng, Chunfang; Carretero-Paulet, Lorenzo; Perez-Torres, Claudia Anahí; Chacón-López, Alejandra; Hernandez-Guzmán, Gustavo; Chang, Tien-Hao; Farr, Kimberly M; Barbazuk, W Brad; Chamala, Srikar; Mutwil, Marek; Shivhare, Devendra; Alvarez-Ponce, David; Mitter, Neena; Hayward, Alice; Fletcher, Stephen; Rozas, Julio; Sánchez Gracia, Alejandro; Kuhn, David; Barrientos-Priego, Alejandro F; Salojärvi, Jarkko; Librado, Pablo; Sankoff, David; Herrera-Estrella, Alfredo; Albert, Victor A; Herrera-Estrella, Luis |
| 2022 | Chromosome-level genome assembly of the diploid blueberry Vaccinium darrowii provides insights into its subtropical adaptation and cuticle synthesis | Cui, Fuqiang; Ye, Xiaoxue; Li, Xiaoxiao; Yang, Yifan; Hu, Zhubing; Overmyer, Kirk; Brosché, Mikael; Yu, Hong; Salojärvi, Jarkko |
| 2020 | Colonic mucosal microbiota and association of bacterial taxa with the expression of host antimicrobial peptides in pediatric ulcerative colitis | Jalanka, Jonna; Cheng, Jing; Hiippala, Kaisa; Ritari, Jarmo; Salojärvi, Jarkko; Ruuska, Tarja; Kalliomäki, Marko; Satokari, Reetta |
| 2022 | Genetic diversity analysis of sapindus in China and extraction of a core germplasm collection using EST-SSR markers | Liu, Jiming; Gao, Shilun; Xu, Yuanyuan; Wang, Mianzhi; Ngiam, Jia Jun; Cho, Nicholas Rui Wen; Jong, Joan Jing Yi; Weng, Xuehuang; Jia, Liming; Salojärvi, Jarkko |
| 2022 | Genomic insights into rapid speciation within the world's largest tree genus Syzygium | Low, Yee Wen; Rajaraman, Sitaram; Tomlin, Crystal M.; Ahmad, Joffre Ali; Ardi, Wisnu H.; Armstrong, Kate; Athen, Parusuraman; Berhaman, Ahmad; Bone, Ruth E.; Cheek, Martin; Cho, Nicholas Rui Wen; Choo, Le Min; Cowie, Ian D.; Crayn, Darren; Fleck, Steven J.; Ford, Andrew J.; Forster, Paul I.; Girmansyah, Deden; Goyder, David J.; Gray, Bruce; Heatubun, Charlie D.; Ibrahim, Ali; Ibrahim, Bazilah; Jayasinghe, Himesh D.; Kalat, Muhammad Ariffin; Kathriarachchi, Hashendra S.; Kintamani, Endang; Koh, Sin Lan; Lai, Joseph T. K.; Lee, Serena M. L.; Leong, Paul K. F.; Lim, Wei Hao; Lum, Shawn Kaihekulani Yamauchi; Mahyuni, Ridha; McDonald, William J. F.; Metali, Faizah; Mustaqim, Wendy A.; Naiki, Akiyo; Ngo, Kang Min; Niissalo, Matti; Ranasinghe, Subhani; Repin, Rimi; Rustiami, Himmah; Simbiak, Victor I.; Sukri, Rahayu S.; Sunarti, Siti; Trethowan, Liam A.; Trias-Blasi, Anna; Vasconcelos, Thais N. C.; Wanma, Jimmy F.; Widodo, Pudji; Wijesundara, Douglas Siril A.; Worboys, Stuart; Yap, Jing Wei; Yong, Kien Thai; Khew, Gillian S. W.; Salojärvi, Jarkko; Michael, Todd P.; Middleton, David J.; Burslem, David F. R. P.; Lindqvist, Charlotte; Lucas, Eve J.; Albert, Victor A. |
| 2021 | Genotype-specific expression and NLR repertoire contribute to phenotypic resistance diversity in Plantago lanceolata | Safdari, Pezhman; Höckerstedt, Layla; Brosche, Mikael; Salojärvi, Jarkko; Laine, Anna-Liisa |
| 2018 | High-throughput sequencing data and the impact of plant gene annotation quality | Vaattovaara, Aleksia; Leppälä, Johanna; Salojärvi, Jarkko; Wrzaczek, Michael |
| 2019 | Interaction of methyl viologen-induced chloroplast and mitochondrial signalling in Arabidopsis | Cui, Fuqiang; Brosché, Mikael; Shapiguzov, Alexey; He, Xin-Qiang; Vainonen, Julia P.; Leppälä, Johanna; Trotta, Andrea; Kangasjärvi, Saijaliisa; Salojärvi, Jarkko; Kangasjärvi, Jaakko; Overmyer, Kirk |
| 2019 | Mechanistic insights into the evolution of DUF26-containing proteins in land plants | Vaattovaara, Aleksia; Brandt, Benjamin; Rajaraman, Sitaram; Safronov, Omid; Veidenberg, Andres; Luklová, Markéta; Kangasjärvi, Jaakko; Löytynoja, Ari; Hothorn, Michael; Salojärvi, Jarkko; Wrzaczek, Michael |
| 2023 | Phylogenetic analysis of allotetraploid species using polarized genomic sequences | Leal, J. Luis; Milesi, Pascal; Salojärvi, Jarkko; Lascoux, Martin |
| 2019 | Tissue-specific study across the stem reveals the chemistry and transcriptome dynamics of birch bark | Alonso-Serra, Juan; Safronov, Omid; Lim, Kean-Jin; Fraser-Miller, Sara J.; Blokhina, Olga B.; Campilho, Ana; Chong, Sun-Li; Fagerstedt, Kurt; Haavikko, Raisa; Helariutta, Ykä; Immanen, Juha; Kangasjärvi, Jaakko; Kauppila, Tiina J.; Lehtonen, Mari; Ragni, Laura; Rajaraman, Sitaram; Räsänen, Riikka-Marjaana; Safdari, Pezhman; Tenkanen, Maija; Yli-Kauhaluoma, Jari T.; Teeri, Teemu H.; Strachan, Clare J.; Nieminen, Kaisa; Salojärvi, Jarkko |
| 2023 | Tree architecture: a strigolactone-deficient mutant reveals a connection between branching order and auxin gradient along the tree stem | Su, Chang; Kokosza, Andrzej; Xie, Xiaonan; Pěnčík, Aleš; Zhang, Youjun; Raumonen, Pasi; Shi, Xueping; Muranen, Sampo; Topcu, Melis Kucukoglu; Immanen, Juha; Hagqvist, Risto; Safronov, Omid; Alonso-Serra, Juan; Eswaran, Gugan; Venegas, Mirko Pavicic; Ljung, Karin; Ward, Sally; Mähönen, Ari Pekka; Himanen, Kristiina; Salojärvi, Jarkko; Fernie, Alisdair R.; Novák, Ondřej; Leyser, Ottoline; Pałubicki, Wojtek; Helariutta, Ykä; Nieminen, Kaisa |