| Issue Date | Title | Author(s) |
| | 2013 | Ab initio folding of extended α-helix : a theoretical study about the role of electrostatic polarization in the folding of helical structures | Lazim, Raudah; Wei, Caiyi; Sun, Tiedong; Zhang, Dawei |
 | 2015 | All-atom molecular dynamics simulation with levels of polarization | Sun, Tiedong |
| 2022 | A bottom-up coarse-grained model for nucleosome–nucleosome interactions with explicit ions | Sun, Tiedong; Minhas, Vishal; Mirzoev, Alexander; Korolev, Nikolay; Lyubartsev, Alexander P.; Nordenskiöld, Lars |
| 2021 | Bottom-up coarse-grained modeling of DNA | Sun, Tiedong; Minhas, Vishal; Korolev, Nikolay; Mirzoev, Alexander; Lyubartsev, Alexander P.; Nordenskiöld, Lars |
| 2020 | Modeling DNA flexibility : comparison of force fields from atomistic to multiscale levels | Minhas, Vishal; Sun, Tiedong; Mirzoev, Alexander; Korolev, Nikolay; Lyubartsev, Alexander P.; Nordenskiöld, Lars |
| 2019 | A multiscale analysis of DNA phase separation : from atomistic to mesoscale level | Sun, Tiedong; Mirzoev, Alexander; Lyubartsev, Alexander P.; Minhas, Vishal; Korolev, Nikolay; Nordenskiöld, Lars |
| 2012 | Solvent effect on the folding dynamics and structure of E6-associated protein characterized from Ab initio protein folding simulations | Xu, Zhijun; Lazim, Raudah; Sun, Tiedong; Mei, Ye; Zhang, Dawei |
