Browsing by Author Verma, Chandra Shekhar


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Issue DateTitleAuthor(s)
2019AppA : a web server for analysis, comparison, and visualization of contact residues and interfacial waters of antibody–antigen structures and modelsNguyen, Minh N.; Verma, Chandra Shekhar; Zhong, Pingyu
2017Characterizing the conformational landscape of MDM2-binding p53 peptides using molecular dynamics simulationsYadahalli, Shilpa; Li, Jianguo; Lane, David P.; Gosavi, Shachi; Verma, Chandra Shekhar
2021A chemical biology approach reveals a dependency of glioblastoma on biotin distributionYoon, Jeehyun; Grinchuk, Oleg V.; Kannan, Srinivasaraghavan; Ang, Melgious Jin Yan; Li, Zhenglin; Tay, Emmy Xue Yun; Lok, Ker Zhing; Lee, Bernice Woon Li; Chuah, You Heng; Chia, Kimberly; Tirado-Magallanes, Roberto; Liu, Chenfei; Zhao, Haonan; Hor, Jin Hui; Lim, Jhin Jieh; Benoukraf, Touati; Toh, Tan Boon; Chow, Edward Kai-Hua; Kovalik, Jean-Paul; Ching, Jianhong; Ng, Shi-Yan; Koh, Ming Joo; Liu, Xiaogang; Verma, Chandra Shekhar; Ong, Derrick Sek Tong
2013A comparison and optimization of methods and factors affecting the transformation of Escherichia coliVerma, Chandra Shekhar; Lane, David P.; Chan, Weng-Tat; Gan, Samuel Ken-En
2018Comparison of charge derivation methods applied to amino acid parameterizationAronica, Pietro G. A.; Fox, Stephen J.; Verma, Chandra Shekhar
2021Computational design of macrocyclic binders of S100B(ββ): novel peptide theranosticsKannan, Srinivasaraghavan; Aronica, Pietro G. A.; Nguyen, Thanh Binh; Li, Jianguo; Verma, Chandra Shekhar
2020Critical role for cold shock protein YB-1 in cytokinesisMehta, Sunali; Algie, Michael; Al-Jabry, Tariq; McKinney, Cushla; Kannan, Srinivasaraghavan; Verma, Chandra Shekhar; Ma, Weini; Zhang, Jessie; Bartolec, Tara K.; Masamsetti, V. Pragathi; Parker, Kim; Henderson, Luke; Gould, Maree L.; Bhatia, Puja; Harfoot, Rhodri; Chircop, Megan; Kleffmann, Torsten; Cohen, Scott B.; Woolley, Adele G.; Cesare, Anthony J.; Braithwaite, Antony
2020Dephosphorylation of YB-1 is required for nuclear localisation during G2 phase of the cell cycleMehta, Sunali; McKinney, Cushla; Algie, Michael; Verma, Chandra Shekhar; Kannan, Srinivasaraghavan; Harfoot, Rhodri; Bartolec, Tara K.; Bhatia, Puja; Fisher, Alistair J.; Gould, Maree L.; Parker, Kim; Cesare, Anthony J.; Cunliffe, Heather E.; Cohen, Scott B.; Kleffmann, Torsten; Braithwaite, Antony W.; Woolley, Adele G.
2019Development and application of a transcriptional sensor for detection of heterologous acrylic acid production in E. coliRaghavan, Sarada S.; Chee, Sharon; Li, Juntao; Poschmann, Jeremie; Nagarajan, Niranjan; Wei, Siau Jia; Verma, Chandra Shekhar; Ghadessy, Farid John
2019Discovering putative protein targets of small molecules : a study of the p53 activator NutlinNguyen, Minh N.; Sen, Neeladri; Lin, Meiyin; Joseph, Thomas Leonard; Vaz, Candida; Tanavde, Vivek; Way, Luke; Hupp, Ted; Verma, Chandra Shekhar; Madhusudhan, M. S.
2014DNAApp: a mobile application for sequencing data analysisNguyen, Phi-Vu; Verma, Chandra Shekhar; Gan, Samuel Ken-En
2019The dual interactions of p53 with MDM2 and p300 : implications for the design of MDM2 inhibitorsKannan, Srinivasaraghavan; Partridge, Anthony William; Lane, David P.; Verma, Chandra Shekhar
 2013Effect of Ser392 Phosphorylation on the Structure and Dynamics of the Polybasic Domain of ADP Ribosylation Factor Nucleotide Site Opener Protein: A Molecular Simulation StudySrinivasaraghavan, Kannan; Nacro, Kassoum; Grüber, Gerhard; Verma, Chandra Shekhar
2018Effects of single nucleotide polymorphisms on the binding of afatinib to EGFR : a potential patient stratification factor revealed by modeling studiesKannan, Srinivasaraghavan; Tan, Daniel Shao-Weng; Verma, Chandra Shekhar
2019Efficient development of stable and highly functionalised peptides targeting the CK2α/CK2β protein–protein interactionIegre, Jessica; Brear, Paul; Baker, David J.; Tan, Yaw Sing; Atkinson, Eleanor L.; Sore, Hannah F.; O' Donovan, Daniel H.; Hyvönen, Marko; Spring, David R.; Verma, Chandra Shekhar
2021Evaluation of host defense peptide (CaD23)-antibiotic interaction and mechanism of action: insights from experimental and molecular dynamics simulations studiesTing, Darren Shu Jeng; Li, Jianguo; Verma, Chandra Shekhar; Goh, Eunice T. L.; Nubile, Mario; Mastropasqua, Leonardo; Said, Dalia G.; Beuerman, Roger W.; Lakshminarayanan, Rajamani; Imran Mohammed; Dua, Harminder S.
 2018A funneled conformational landscape governs flavivirus fusion peptide interaction with lipid membranesMarzinek, Jan Kazimierz; Bag, Nirmalya; Huber, Roland G.; Holdbrook, Daniel A.; Wohland, Thorsten; Verma, Chandra Shekhar; Bond, Peter John
 2018Homologous Lympho-epithelial Kazal-type inhibitor domains delay blood coagulation by inhibiting factor X and XI with differential specificityRamesh, Karthik; Lama, Dilraj; Tan, Kang Wei; Nguyen, Van Sang; Chew, Fook Tim; Verma, Chandra Shekhar; Mok, Yu Keung
2020Increased protein S-glutathionylation in Leber’s hereditary optic neuropathy (LHON)Zhou, Lei; Chan, James Chun Yip; Chupin, Stephanie; Gueguen, Naïg; Desquiret-Dumas, Valérie; Koh, Siew Kwan; Li, Jianguo; Gao, Yan; Deng, Lu; Verma, Chandra Shekhar; Beuerman, Roger W.; Chan, Eric Chun Yong; Milea, Dan; Reynier, Pascal
2019Inhibiting S100B(ββ) for activating wild-type p53 : design of stapled peptidesKannan, Srinivasaraghavan; Aronica, Pietro G. A.; Tan, Yaw Sing; Verma, Chandra Shekhar