| Issue Date | Title | Author(s) |
 | 2023 | About the dark corners in the gene function space of Escherichia coli remaining without illumination by scientific literature | Tantoso, Erwin; Eisenhaber, Birgit; Sinha, Swati; Jensen, Lars Juhl; Eisenhaber, Frank |
| | 2018 | Active site CP-loop dynamics modulate substrate binding, catalysis, oligomerization, stability, over-oxidation and recycling of 2-Cys Peroxiredoxins | Kamariah, Neelagandan; Eisenhaber, Birgit; Eisenhaber, Frank; Grüber, Gerhard |
| 2022 | Analysis of clinically relevant variants from ancestrally diverse Asian genomes | Chan, Sock Hoai; Bylstra, Yasmin; Teo, Jing Xian; Kuan, Jyn Ling; Bertin, Nicolas; Gonzalez-Porta, Mar; Hebrard, Maxime; Tirado-Magallanes, Roberto; Tan, Joanna Hui Juan; Jeyakani, Justin; Li, Zhihui; Chai, Jin Fang; Chong, Yap Seng; Davila, Sonia; Goh, Liuh Ling; Lee, Eng Sing; Wong, Eleanor; Wong, Tien Yin; Prabhakar, Shyam; Liu, Jianjun; Cheng, Ching-Yu; Eisenhaber, Birgit; Karnani, Neerja; Leong, Khai Pang; Sim, Xueling; Yeo, Khung Keong; Chambers, John Campbell; Tai, E-Shyong; Tan, Patrick; Jamuar, Saumya S.; Ngeow, Joanne; Lim, Weng Khong |
| | 2012 | Beware of moving tagerts: reference proteome content fluctuates substantially over the years | Sirota, Fernanda L.; Batagov, Arsen; Schneider, Georg; Eisenhaber, Birgit; Eisenhaber, Frank; Maurer-Stroh, Sebastian |
| 2017 | Charged residues next to transmembrane regions revisited: “Positive-inside rule” is complemented by the “negative inside depletion/outside enrichment rule” | Baker, James Alexander; Wong, Wing-Cheong; Eisenhaber, Birgit; Warwicker, Jim; Eisenhaber, Frank |
| 2021 | Conserved sequence motifs in human TMTC1, TMTC2, TMTC3, and TMTC4, new O-mannosyltransferases from the GT-C/PMT clan, are rationalized as ligand binding sites | Eisenhaber, Birgit; Sinha, Swati; Jadalanki, Chaitanya K.; Shitov, Vladimir A.; Tan, Qiao Wen; Sirota, Fernanda L.; Eisenhaber, Frank |
| 2018 | Darkness in the human gene and protein function space : widely modest or absent illumination by the life science literature and the trend for fewer protein function discoveries since 2000 | Sinha, Swati; Eisenhaber, Birgit; Jensen, Lars Juhl; Kalbuaji, Bharata; Eisenhaber, Frank |
| 2015 | dissectHMMER: a HMMER-based score dissection framework that statistically evaluates fold-critical sequence segments for domain fold similarity | Wong, Wing-Cheong; Yap, Choon-Kong; Eisenhaber, Birgit; Eisenhaber, Frank |
| 2019 | Effect of the additional cysteine 503 of vancomycin-resistant Enterococcus faecalis (V583) alkylhydroperoxide reductase subunit F (AhpF) and the mechanism of AhpF and subunit C assembling | Toh, Yew Kwang; Shin, Joon; Balakrishna, Asha Manikkoth; Kamariah, Neelagandan; Grüber, Ardina; Eisenhaber, Frank; Eisenhaber, Birgit; Grüber, Gerhard |
| 2017 | Essential role of the flexible linker on the conformational equilibrium of bacterial peroxiredoxin reductase for effective regeneration of peroxiredoxin | Grüber, Gerhard; Kamariah, Neelagandan; Eisenhaber, Birgit; Eisenhaber, Frank |
| 2021 | Functional classification of super-large families of enzymes based on substrate binding pocket residues for biocatalysis and enzyme engineering applications | Sirota, Fernanda L.; Maurer-Stroh, Sebastian; Li, Zhi; Eisenhaber, Frank; Eisenhaber, Birgit |
| 2019 | Genomics-driven discovery of a biosynthetic gene cluster required for the synthesis of BII-Rafflesfungin from the fungus Phoma sp. F3723 | Sinha, Swati; Nge, Choy-Eng; Leong, Chung Yan; Ng, Veronica; Crasta, Sharon; Goh, Falicia; Low, Kia-Ngee; Zhang, Huibin; Arumugam, Prakash; Lezhava, Alexander; Chen, Swaine L.; Kanagasundaram, Yoganathan; Ng, Siew Bee; Eisenhaber, Frank; Eisenhaber, Birgit; Mohammad Alfatah |
| 2020 | Identification and engineering of 32 membered antifungal macrolactone notonesomycins | Goh, Falicia; Zhang, Mingzi M.; Lim, Tian Ru; Low, Kia Ngee; Nge, Choy Eng; Heng, Elena; Yeo, Wan Lin; Sirota, Fernanda L.; Crasta, Sharon; Tan, Zann; Ng, Veronica; Leong, Chung Yan; Zhang, Huibin; Lezhava, Alexander; Chen, Swaine L.; Hoon, Shawn S.; Eisenhaber, Frank; Eisenhaber, Birgit; Kanagasundaram, Yoganathan; Wong, Fong T.; Ng, Siew Bee |
| 2018 | Molecular mechanism of the Escherichia coli AhpC in the function of a chaperone under heat-shock conditions | Kamariah, Neelagandan; Eisenhaber, Birgit; Eisenhaber, Frank; Grüber, Gerhard |
| 2014 | On the necessity of dissecting sequence similarity scores into segment-specific contributions for inferring protein homology, function prediction and annotation | Wong, Wing-Cheong; Maurer-Stroh, Sebastian; Eisenhaber, Birgit; Eisenhaber, Frank |
| 2020 | Structural modelling of the lumenal domain of human GPAA1, the metallo-peptide synthetase subunit of the transamidase complex, reveals zinc-binding mode and two flaps surrounding the active site | Su, Chinh Tran-To; Sinha, Swati; Eisenhaber, Birgit; Eisenhaber, Frank |
| 2016 | Transition steps in peroxide reduction and a molecular switch for peroxide robustness of prokaryotic peroxiredoxins | Kamariah, Neelagandan; Sek, Mun Foong; Eisenhaber, Birgit; Eisenhaber, Frank; Grüber, Gerhard |
| 2016 | xHMMER3x2: Utilizing HMMER3’s speed and HMMER2’s sensitivity and specificity in the glocal alignment mode for improved large-scale protein domain annotation | Yap, Choon-Kong; Eisenhaber, Birgit; Eisenhaber, Frank; Wong, Wing-Cheong |
