Academic Profile : Faculty

Asst Prof Kim Hie Lim
Assistant Chair (Academic), Asian School of the Environment
Assistant Professor, Asian School of the Environment
Assistant Professor, Singapore Centre for Environmental Life Sciences Engineering
Email
Journal Articles
(Not applicable to NIE
staff as info will be
pulled from PRDS)
(Not applicable to NIE
staff as info will be
pulled from PRDS)
Kim, HL, Li, T, Kalsi, N. Nguyen, HTT., Shaw TA, Ang KC, Cheng KC, Ratan A, Peltier WR, Samanta D, Pratapneni M, Schuster SC, Horton BP, Prehistoric human migration between Sundaland and South Asia was driven by sea-level rise. Commun Biol 6, 150, 2023 Feb, https://doi.org/10.1038/s42003-023-04510-0
Lorenzini PA, Gusareva ES, Ghosh AG, Ramli NAB, Preiser PR, Kim HL, Population-specific positive selection on low CR1 expression in malaria-endemic regions, PLoS ONE, 18, Issue 1, 2023 Jan, https://doi.org/10.1371/journal.pone.0280282
Cheung R, Jolly S, Vimal M, Kim HL, and McGonigle I (2022). Who’s afraid of genetic test?: an assessment of Singapore’s public attitudes and changes in attitudes after taking a genetic test, BMC Medical Ethics, Vol 23, 5. https://doi.org/10.1186/s12910-022-00744-5
Gusareva ES, Lorenzini PA, Ramli NAB, Ghosh AG, and Kim HL (2021). Population-specific adaptation in malaria-endemic regions of Asia. JBCB, Vol. 19. https://doi.org/10.1142/S0219720021400060
Wall JD, Ratan A, Swawiski E, Kim HL, Kim C, Gupta R, Suryamohan K, Gusareva ES, Purbojati RW, Bhangale T, Stepanov V, Kharkov V, Schrӧder MS, Ramprasad V, Tom J, Durinck S, Bei Q, Li J, Guillory J, Phalke S, Basu A, Stinson J, Nair S, Malaichamy S, Biswas NK, Chambers JC, Cheng KC, George JT, Khor SS, Kim JI, Cho B, Menon R, Sattibabu T, Bassi A, Deshmukh M, Verma A, Gopalan V, Shin JY, Pratapneni M, Santhosh S, Tokunaga K, Md-Zain BM, Chan KG, Parani M, Natarajan P, Hauser M, Allingham RR, Santiago-Turla C, Ghosh A, Gadde SGK, Fuchsberger C, Forer L, Shoenherr S, Sudoyo H, Lansing JS, Friedlaender J, Koki G, Cox MP, Hammer M, Karafet T, Ang KC, Mehdi SQ, Radha V, Mohan V, Majumder PP, Seshagiri S, Seo JS, Schuster S, Peterson AS. Identification of African-Specific Admixture between Modern and Archaic Humans, AJHG, Vol. 105, pp. 1254-1261, 2019. https://doi.org/10.1016/j.ajhg.2019.11.005
Wall JD, Stawiski EW, Ratan A, Kim HL, Kim C, Gupta R, Suryamohan K, Gusareva ES, Purbojati RW, Bhangale T, Stepanov V, Kharkov V, Schröder MS, Ramprasad V, Tom J, Durinck S, Bei Q, Li J, Guillory J, Phalke S, Basu A, Stinson J, Nair S, Malaichamy S, Biswas NK, Chambers JC, Cheng KC, George JT, Khor SS, Kim JI, Cho B, Menon R, Sattibabu T, Bassi A, Deshmukh M, Verma A, Gopalan V, Shin JY, Pratapneni M, Santhosh S, Tokunaga K, Md-Zain BM, Chan KG, Parani M, Natarajan P, Hauser M, Allingham RR, Santiago-Turla C, Ghosh A, Gadde SGK, Fuchsberger C, Forer L, Schoenherr S, Sudoyo H, Lansing JS, Friedlaender J, Koki G, Cox MP, Hammer M, Karafet T, Ang KC, Mehdi SQ, Radha V, Mohan V, Majumder PP, Seshagiri S, Seo JS, Schuster SC, Peterson AS. The GenomeAsia 100K Project enables genetic discoveries across Asia. Nature, Vol. 576, pp. 106-111, 2019. https://doi.org/10.1038/s41586-019-1793-z
Yoo SK, Kim CU, Kim HL, Kim S, Shin JY, Kim N, Yang JSW, Lo WQ, Cho B, Matsuda F, Schuster SC, Kim C, Kim JI, and Seo JS, NARD: whole-genome reference panel of 1779 Northeast Asians improves imputation accuracy of rare and low-frequency variants, Genome medicine, Vol. 11, pp. 1-10, 2019. https://doi.org/10.1186/s13073-019-0677-z
Kim HL., Ratan A., Perry GH., Montenegro A., Miller W., and Schuster SC. 2014. Khoisan hunter-gatherers have been the largest population throughout most of modern human demographic history, Nature Communications, 5:5692, 2014. https://doi.org/10.1038/ncomms6692
Kim HL., Schuster SC. Poor man’s 1000 genome project: recent human population expansion confounds the detection of disease alleles in 7,098 complete mitochondrial genomes, Frontiers in Genetics, Vol. 4, Article 13. 2013. https://doi.org/10.3389/fgene.2013.00013
Gupta R., Ratan A., Rajesh C., Chen R., Kim HL., Burhans R., Miller W., Santhosh S., Davuluri RV., Butte AJ., et al. Sequencing and analysis of a South Asian-Indian personal genome, BMC Genomics, Vol. 13, 440. 2012. https://doi.org/10.1186/1471-2164-13-440
Miller W., Schuster SC., Welch AJ., Ratan A., Bedoya-Reina OC., Zhao F., Kim HL., Burhans RC., Drautz DI., Wittekindt NE., et al. Polar and brown bear genomes reveal ancient admixture and demographic footprints of past climate change, Proc. Natl. Acad. Sci. USA., Vol 109. E2382-E2390. 2012. https://doi.org/10.1073/pnas.1210506109
Kim HL., Igawa T., Kawashima A., Satta Y., and Takahata N., Divergence, demography and gene loss along the Human lineage, Phil. Trans. R. Soc. B., Vol. 365, pp. 2451-2457, 2010. https://doi.org/10.1098/rstb.2010.0004
Kim HL. and Satta Y., Population genetic analysis of the N-Acylsphingosine Amidohydrolase gene associated with mental activity in Humans, Genetics, Vol. 178, pp.1505-1515, March, 2008. https://doi.org/10.1534/genetics.107.083691
Lorenzini PA, Gusareva ES, Ghosh AG, Ramli NAB, Preiser PR, Kim HL, Population-specific positive selection on low CR1 expression in malaria-endemic regions, PLoS ONE, 18, Issue 1, 2023 Jan, https://doi.org/10.1371/journal.pone.0280282
Cheung R, Jolly S, Vimal M, Kim HL, and McGonigle I (2022). Who’s afraid of genetic test?: an assessment of Singapore’s public attitudes and changes in attitudes after taking a genetic test, BMC Medical Ethics, Vol 23, 5. https://doi.org/10.1186/s12910-022-00744-5
Gusareva ES, Lorenzini PA, Ramli NAB, Ghosh AG, and Kim HL (2021). Population-specific adaptation in malaria-endemic regions of Asia. JBCB, Vol. 19. https://doi.org/10.1142/S0219720021400060
Wall JD, Ratan A, Swawiski E, Kim HL, Kim C, Gupta R, Suryamohan K, Gusareva ES, Purbojati RW, Bhangale T, Stepanov V, Kharkov V, Schrӧder MS, Ramprasad V, Tom J, Durinck S, Bei Q, Li J, Guillory J, Phalke S, Basu A, Stinson J, Nair S, Malaichamy S, Biswas NK, Chambers JC, Cheng KC, George JT, Khor SS, Kim JI, Cho B, Menon R, Sattibabu T, Bassi A, Deshmukh M, Verma A, Gopalan V, Shin JY, Pratapneni M, Santhosh S, Tokunaga K, Md-Zain BM, Chan KG, Parani M, Natarajan P, Hauser M, Allingham RR, Santiago-Turla C, Ghosh A, Gadde SGK, Fuchsberger C, Forer L, Shoenherr S, Sudoyo H, Lansing JS, Friedlaender J, Koki G, Cox MP, Hammer M, Karafet T, Ang KC, Mehdi SQ, Radha V, Mohan V, Majumder PP, Seshagiri S, Seo JS, Schuster S, Peterson AS. Identification of African-Specific Admixture between Modern and Archaic Humans, AJHG, Vol. 105, pp. 1254-1261, 2019. https://doi.org/10.1016/j.ajhg.2019.11.005
Wall JD, Stawiski EW, Ratan A, Kim HL, Kim C, Gupta R, Suryamohan K, Gusareva ES, Purbojati RW, Bhangale T, Stepanov V, Kharkov V, Schröder MS, Ramprasad V, Tom J, Durinck S, Bei Q, Li J, Guillory J, Phalke S, Basu A, Stinson J, Nair S, Malaichamy S, Biswas NK, Chambers JC, Cheng KC, George JT, Khor SS, Kim JI, Cho B, Menon R, Sattibabu T, Bassi A, Deshmukh M, Verma A, Gopalan V, Shin JY, Pratapneni M, Santhosh S, Tokunaga K, Md-Zain BM, Chan KG, Parani M, Natarajan P, Hauser M, Allingham RR, Santiago-Turla C, Ghosh A, Gadde SGK, Fuchsberger C, Forer L, Schoenherr S, Sudoyo H, Lansing JS, Friedlaender J, Koki G, Cox MP, Hammer M, Karafet T, Ang KC, Mehdi SQ, Radha V, Mohan V, Majumder PP, Seshagiri S, Seo JS, Schuster SC, Peterson AS. The GenomeAsia 100K Project enables genetic discoveries across Asia. Nature, Vol. 576, pp. 106-111, 2019. https://doi.org/10.1038/s41586-019-1793-z
Yoo SK, Kim CU, Kim HL, Kim S, Shin JY, Kim N, Yang JSW, Lo WQ, Cho B, Matsuda F, Schuster SC, Kim C, Kim JI, and Seo JS, NARD: whole-genome reference panel of 1779 Northeast Asians improves imputation accuracy of rare and low-frequency variants, Genome medicine, Vol. 11, pp. 1-10, 2019. https://doi.org/10.1186/s13073-019-0677-z
Kim HL., Ratan A., Perry GH., Montenegro A., Miller W., and Schuster SC. 2014. Khoisan hunter-gatherers have been the largest population throughout most of modern human demographic history, Nature Communications, 5:5692, 2014. https://doi.org/10.1038/ncomms6692
Kim HL., Schuster SC. Poor man’s 1000 genome project: recent human population expansion confounds the detection of disease alleles in 7,098 complete mitochondrial genomes, Frontiers in Genetics, Vol. 4, Article 13. 2013. https://doi.org/10.3389/fgene.2013.00013
Gupta R., Ratan A., Rajesh C., Chen R., Kim HL., Burhans R., Miller W., Santhosh S., Davuluri RV., Butte AJ., et al. Sequencing and analysis of a South Asian-Indian personal genome, BMC Genomics, Vol. 13, 440. 2012. https://doi.org/10.1186/1471-2164-13-440
Miller W., Schuster SC., Welch AJ., Ratan A., Bedoya-Reina OC., Zhao F., Kim HL., Burhans RC., Drautz DI., Wittekindt NE., et al. Polar and brown bear genomes reveal ancient admixture and demographic footprints of past climate change, Proc. Natl. Acad. Sci. USA., Vol 109. E2382-E2390. 2012. https://doi.org/10.1073/pnas.1210506109
Kim HL., Igawa T., Kawashima A., Satta Y., and Takahata N., Divergence, demography and gene loss along the Human lineage, Phil. Trans. R. Soc. B., Vol. 365, pp. 2451-2457, 2010. https://doi.org/10.1098/rstb.2010.0004
Kim HL. and Satta Y., Population genetic analysis of the N-Acylsphingosine Amidohydrolase gene associated with mental activity in Humans, Genetics, Vol. 178, pp.1505-1515, March, 2008. https://doi.org/10.1534/genetics.107.083691