Please use this identifier to cite or link to this item: https://hdl.handle.net/10356/95996
Title: Tachyon search speeds up retrieval of similar sequences by several orders of magnitude
Authors: Sirota, Fernanda L.
Sherman, Westley A.
Tan, Joshua
Kuchibhatla, Durga
Gattermayer, Tobias
Kwoh, Chia Yee
Eisenhaber, Frank
Schneider, Georg
Maurer-Stroh, Sebastian
Issue Date: 2012
Source: Tan, J., Kuchibhatla, D., Sirota, F. L., Sherman, W. A., Gattermayer, T., Kwoh, C. Y., et al. (2012). Tachyon search speeds up retrieval of similar sequences by several orders of magnitude. Bioinformatics, 28(12), 1645-1646.
Series/Report no.: Bioinformatics
Abstract: Summary: The usage of current sequence search tools becomes increasingly slower as databases of protein sequences continue to grow exponentially. Tachyon, a new algorithm that identifies closely related protein sequences ~200 times faster than standard BLAST, circumvents this limitation with a reduced database and oligopeptide matching heuristic.
URI: https://hdl.handle.net/10356/95996
http://hdl.handle.net/10220/10780
ISSN: 1367-4803
DOI: http://dx.doi.org/10.1093/bioinformatics/bts197
Rights: © 2012 The Author(s).
metadata.item.grantfulltext: none
metadata.item.fulltext: No Fulltext
Appears in Collections:SBS Journal Articles
SCSE Journal Articles

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