Please use this identifier to cite or link to this item: https://hdl.handle.net/10356/147055
Title: Ethnicity-specific skeletal muscle transcriptional signatures and their relevance to insulin resistance in Singapore
Authors: Tan, Amelia Li Min
Langley, Sarah R.
Tan, Chee Fan
Chai, Jin Fang
Khoo, Chin Meng
Leow, Melvin Khee-Shing
Khoo, Eric Yin Hao
Moreno-Moral, Aida
Pravenec, Michal
Rotival, Maxime
Sadananthan, Suresh Anand
Velan, S. Sendhil
Venkataraman, Kavita
Chong, Yap Seng
Lee, Yung Seng
Sim, Xueling
Stunkel, Walter
Liu, Mei Hui
Tai, E. Shyong
Petretto, Enrico
Keywords: Science::Medicine
Issue Date: 2019
Source: Tan, A. L. M., Langley, S. R., Tan, C. F., Chai, J. F., Khoo, C. M., Leow, M. K., Khoo, E. Y. H., Moreno-Moral, A., Pravenec, M., Rotival, M., Sadananthan, S. A., Velan, S. S., Venkataraman, K., Chong, Y. S., Lee, Y. S., Sim, X., Stunkel, W., Liu, M. H., Tai, E. S. & Petretto, E. (2019). Ethnicity-specific skeletal muscle transcriptional signatures and their relevance to insulin resistance in Singapore. The Journal of Clinical Endocrinology & Metabolism, 104(2), 465-486. https://dx.doi.org/10.1210/jc.2018-00309
Project: NMRC/TCR/004-NUS/2008
IAF311002
NMRC/CSA-SI/0002
NMRC/BNIG/2027/2015
Journal: The Journal of Clinical Endocrinology & Metabolism
Abstract: Context - Insulin resistance (IR) and obesity differ among ethnic groups in Singapore, with the Malays more obese yet less IR than Asian-Indians. However, the molecular basis underlying these differences is not clear. Objective - As the skeletal muscle (SM) is metabolically relevant to IR, we investigated molecular pathways in SM that are associated with ethnic differences in IR, obesity, and related traits. Design, Setting, and Main Outcome Measures - We integrated transcriptomic, genomic, and phenotypic analyses in 156 healthy subjects representing three major ethnicities in the Singapore Adult Metabolism Study. Patients - This study contains Chinese (n = 63), Malay (n = 51), and Asian-Indian (n = 42) men, aged 21 to 40 years, without systemic diseases. Results - We found remarkable diversity in the SM transcriptome among the three ethnicities, with >8000 differentially expressed genes (40% of all genes expressed in SM). Comparison with blood transcriptome from a separate Singaporean cohort showed that >95% of SM expression differences among ethnicities were unique to SM. We identified a network of 46 genes that were specifically downregulated in Malays, suggesting dysregulation of components of cellular respiration in SM of Malay individuals. We also report 28 differentially expressed gene clusters, four of which were also enriched for genes that were found in genome-wide association studies of metabolic traits and disease and correlated with variation in IR, obesity, and related traits. Conclusion - We identified extensive gene-expression changes in SM among the three Singaporean ethnicities and report specific genes and molecular pathways that might underpin and explain the differences in IR among these ethnic groups.
URI: https://hdl.handle.net/10356/147055
ISSN: 0021-972X
DOI: 10.1210/jc.2018-00309
Rights: © 2019 Endocrine Society. All rights reserved.
Fulltext Permission: none
Fulltext Availability: No Fulltext
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