Please use this identifier to cite or link to this item: https://hdl.handle.net/10356/149399
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dc.contributor.authorNieuwenhuijse, David F.en_US
dc.contributor.authorOude Munnink, Bas B.en_US
dc.contributor.authorPhan, My V. T.en_US
dc.contributor.authorMunk, Patricken_US
dc.contributor.authorVenkatakrishnan, Shwetaen_US
dc.contributor.authorAarestrup, Frank M.en_US
dc.contributor.authorCotten, Matthewen_US
dc.contributor.authorKoopmans, Marion P. G.en_US
dc.contributor.authorTay, Moon Yue Fengen_US
dc.contributor.authorZuniga-Montanez, Rogelioen_US
dc.contributor.authorWuertz, Stefanen_US
dc.date.accessioned2021-07-28T07:36:17Z-
dc.date.available2021-07-28T07:36:17Z-
dc.date.issued2020-
dc.identifier.citationNieuwenhuijse, D. F., Oude Munnink, B. B., Phan, M. V. T., Munk, P., Venkatakrishnan, S., Aarestrup, F. M., Cotten, M., Koopmans, M. P. G., Tay, M. Y. F., Zuniga-Montanez, R. & Wuertz, S. (2020). Setting a baseline for global urban virome surveillance in sewage. Scientific Reports, 10(1). https://dx.doi.org/10.1038/s41598-020-69869-0en_US
dc.identifier.issn2045-2322en_US
dc.identifier.urihttps://hdl.handle.net/10356/149399-
dc.description.abstractThe rapid development of megacities, and their growing connectedness across the world is becoming a distinct driver for emerging disease outbreaks. Early detection of unusual disease emergence and spread should therefore include such cities as part of risk-based surveillance. A catch-all metagenomic sequencing approach of urban sewage could potentially provide an unbiased insight into the dynamics of viral pathogens circulating in a community irrespective of access to care, a potential which already has been proven for the surveillance of poliovirus. Here, we present a detailed characterization of sewage viromes from a snapshot of 81 high density urban areas across the globe, including in-depth assessment of potential biases, as a proof of concept for catch-all viral pathogen surveillance. We show the ability to detect a wide range of viruses and geographical and seasonal differences for specific viral groups. Our findings offer a cross-sectional baseline for further research in viral surveillance from urban sewage samples and place previous studies in a global perspective.en_US
dc.language.isoenen_US
dc.relation.ispartofScientific Reportsen_US
dc.rights© 2020 The Author(s). This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.en_US
dc.subjectEngineering::Environmental engineeringen_US
dc.titleSetting a baseline for global urban virome surveillance in sewageen_US
dc.typeJournal Articleen
dc.contributor.researchSingapore Centre for Environmental Life Sciences and Engineeringen_US
dc.contributor.researchNanyang Technological University Food Technology Centre (NAFTEC)en_US
dc.identifier.doi10.1038/s41598-020-69869-0-
dc.description.versionPublished versionen_US
dc.identifier.pmid32792677-
dc.identifier.scopus2-s2.0-85089383261-
dc.identifier.issue1en_US
dc.identifier.volume10en_US
dc.subject.keywordsMetagenomicsen_US
dc.subject.keywordsPublic Healthen_US
item.fulltextWith Fulltext-
item.grantfulltextopen-
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