Please use this identifier to cite or link to this item: https://hdl.handle.net/10356/63186
Title: Visualizing multi-faceted functional decomposition of protein interaction networks (FACETS)
Authors: Chen, Mengxuan
Keywords: DRNTU::Engineering::Computer science and engineering::Computer applications::Life and medical sciences
Issue Date: 2015
Abstract: Through the studies of the technical background of FACETS, FACETS Viewer was proposed in order to provide a user interface (UI) to visualize the protein interaction network. The key requirements of the software have been clearly stated, which requires re-designing user experience (UX). The visualization schemes were introduced accordingly. Not only were the UI components and layout considered, but the coloring methodology was also taken into account. In order to further implement the software, architectural design has been finalized and implementation details have been clarified, including the use of Gephi Toolkit package and Java Swing widget toolkit. Moreover, series of experiments were conducted across different network files to measure the performance of FACETS Viewer with different rendering configurations. Besides the technical details, a walkthrough for the software demonstrates an easy-to-follow workflow and its user-friendly interface. Finally, based on the experimental results, conclusions were given to summarize the project and recommendations were provided to suggest possible future improvement.
URI: http://hdl.handle.net/10356/63186
Rights: Nanyang Technological University
Fulltext Permission: restricted
Fulltext Availability: With Fulltext
Appears in Collections:SCSE Student Reports (FYP/IA/PA/PI)

Files in This Item:
File Description SizeFormat 
FYP_Report_Visualizing_FACETS_Chen_Mengxuan.pdf
  Restricted Access
SCE FYP Report9.87 MBAdobe PDFView/Open

Page view(s) 20

104
checked on Sep 22, 2020

Download(s) 20

9
checked on Sep 22, 2020

Google ScholarTM

Check

Items in DR-NTU are protected by copyright, with all rights reserved, unless otherwise indicated.