Please use this identifier to cite or link to this item: https://hdl.handle.net/10356/72200
Title: 3D/2D rodent brain extraction using shape model and instance learning
Authors: Ling, Chen
Keywords: DRNTU::Engineering::Electrical and electronic engineering
Issue Date: 2017
Abstract: Accurate rodent brain extraction is one of the basic steps for many translational study using Magnetic Resonance Imaging (MRI). In this report, we present a new approach to model the rodent brain variation using non-rigid B-spline image registration for the brain extraction in MRI images. We model the shape and appearance with the B-spline parameters together with a mean brain image. Followed by a method using multi-expert, we refine the brain extraction region. Compared with the image-based template model using cross-correlation, the performance for rodent brain extraction has shown much improvement on one data set while maintaining the similar yet more consistent performance for another. Both template based methods however outperform the voxel based method (3D PCNN) and a modified BET version for rodent brain extraction.
URI: http://hdl.handle.net/10356/72200
Rights: Nanyang Technological University
Fulltext Permission: restricted
Fulltext Availability: With Fulltext
Appears in Collections:EEE Student Reports (FYP/IA/PA/PI)

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