Please use this identifier to cite or link to this item:
https://hdl.handle.net/10356/95996| Title: | Tachyon search speeds up retrieval of similar sequences by several orders of magnitude | Authors: | Sirota, Fernanda L. Sherman, Westley A. Tan, Joshua Kuchibhatla, Durga Gattermayer, Tobias Kwoh, Chia Yee Eisenhaber, Frank Schneider, Georg Maurer-Stroh, Sebastian |
Issue Date: | 2012 | Source: | Tan, J., Kuchibhatla, D., Sirota, F. L., Sherman, W. A., Gattermayer, T., Kwoh, C. Y., et al. (2012). Tachyon search speeds up retrieval of similar sequences by several orders of magnitude. Bioinformatics, 28(12), 1645-1646. | Series/Report no.: | Bioinformatics | Abstract: | Summary: The usage of current sequence search tools becomes increasingly slower as databases of protein sequences continue to grow exponentially. Tachyon, a new algorithm that identifies closely related protein sequences ~200 times faster than standard BLAST, circumvents this limitation with a reduced database and oligopeptide matching heuristic. | URI: | https://hdl.handle.net/10356/95996 http://hdl.handle.net/10220/10780 |
ISSN: | 1367-4803 | DOI: | 10.1093/bioinformatics/bts197 | Schools: | School of Computer Engineering School of Biological Sciences |
Rights: | © 2012 The Author(s). | Fulltext Permission: | none | Fulltext Availability: | No Fulltext |
| Appears in Collections: | SBS Journal Articles SCSE Journal Articles |
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